i can't run mpi job : rank 2 in job 1 abinitio01_57362 caused collective abort of all ranks

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b60507

i can't run mpi job : rank 2 in job 1 abinitio01_57362 caused collective abort of all ranks

#1 Post by b60507 » Sat Aug 29, 2009 12:25 am

my computer structure :
intel Intel(R) Core(TM)2 Quad CPU Q9550 @ 2.83GHz
i have 4 computer, 3 nodes
fedora 11 X64

software:
intel fortran complier 11.1 intel64
intel C complier 11.1 intel64
intel MPI(3.2.1.009 intel64) MPICH2(1.0.7, 1.1.1p1) i had tried these version

VASP 4.6
VASP compile success
i can run job in single cpu
when i use the mpi , there are some error message


[b60507@abinitio01 5]$ mpdrun -machinefile ~/machine -n 12 vasp_parallel
running on 12 nodes
distr: one band on 12 nodes, 1 groups
vasp.4.6.31 08Feb07 complex
POSCAR found : 1 types and 6 ions
LDA part: xc-table for Ceperly-Alder, standard interpolation
found WAVECAR, reading the header
nup: number of bands has changed, file: 0 present: 16
POSCAR, INCAR and KPOINTS ok, starting setup
FFT: planning ... 2
forrtl: severe (174): SIGSEGV, segmentation fault occurred
Image PC Routine Line Source
vasp_parallel 000000000066F5B9 Unknown Unknown Unknown
vasp_parallel 0000000000651552 Unknown Unknown Unknown
vasp_parallel 0000000000651358 Unknown Unknown Unknown
vasp_parallel 000000000041D8D1 Unknown Unknown Unknown
vasp_parallel 000000000040790C Unknown Unknown Unknown
libc.so.6 000000376981EA2D Unknown Unknown Unknown
vasp_parallel 0000000000407809 Unknown Unknown Unknown
forrtl: severe (174): SIGSEGV, segmentation fault occurred
Image PC Routine Line Source
vasp_parallel 000000000066F5B9 Unknown Unknown Unknown
vasp_parallel 0000000000651552 Unknown Unknown Unknown
vasp_parallel 0000000000651358 Unknown Unknown Unknown
vasp_parallel 000000000041D8D1 Unknown Unknown Unknown
vasp_parallel 000000000040790C Unknown Unknown Unknown
libc.so.6 000000376981EA2D Unknown Unknown Unknown
vasp_parallel 0000000000407809 Unknown Unknown Unknown
forrtl: severe (174): SIGSEGV, segmentation fault occurred
Image PC Routine Line Source
vasp_parallel 000000000066F5B9 Unknown Unknown Unknown
vasp_parallel 0000000000651552 Unknown Unknown Unknown
vasp_parallel 0000000000651358 Unknown Unknown Unknown
vasp_parallel 000000000041D8D1 Unknown Unknown Unknown
vasp_parallel 000000000040790C Unknown Unknown Unknown
libc.so.6 000000376981EA2D Unknown Unknown Unknown
vasp_parallel 0000000000407809 Unknown Unknown Unknown
forrtl: severe (174): SIGSEGV, segmentation fault occurred
Image PC Routine Line Source
vasp_parallel 000000000066F5B9 Unknown Unknown Unknown
vasp_parallel 0000000000651552 Unknown Unknown Unknown
vasp_parallel 0000000000651358 Unknown Unknown Unknown
vasp_parallel 000000000041D8D1 Unknown Unknown Unknown
vasp_parallel 000000000040790C Unknown Unknown Unknown
libc.so.6 000000376981EA2D Unknown Unknown Unknown
vasp_parallel 0000000000407809 Unknown Unknown Unknown
forrtl: severe (174): SIGSEGV, segmentation fault occurred
Image PC Routine Line Source
vasp_parallel 000000000066F5B9 Unknown Unknown Unknown
vasp_parallel 0000000000651552 Unknown Unknown Unknown
vasp_parallel 0000000000651358 Unknown Unknown Unknown
vasp_parallel 000000000041D8D1 Unknown Unknown Unknown
vasp_parallel 000000000040790C Unknown Unknown Unknown
libc.so.6 000000376981EA2D Unknown Unknown Unknown
vasp_parallel 0000000000407809 Unknown Unknown Unknown
rank 9 in job 1 abinitio01_57362 caused collective abort of all ranks
exit status of rank 9: return code 174
forrtl: severe (174): SIGSEGV, segmentation fault occurred
Image PC Routine Line Source
vasp_parallel 000000000066F5B9 Unknown Unknown Unknown
vasp_parallel 0000000000651552 Unknown Unknown Unknown
vasp_parallel 0000000000651358 Unknown Unknown Unknown
vasp_parallel 000000000041D8D1 Unknown Unknown Unknown
vasp_parallel 000000000040790C Unknown Unknown Unknown
libc.so.6 000000376981EA2D Unknown Unknown Unknown
vasp_parallel 0000000000407809 Unknown Unknown Unknown
rank 7 in job 1 abinitio01_57362 caused collective abort of all ranks
exit status of rank 7: killed by signal 9
rank 2 in job 1 abinitio01_57362 caused collective abort of all ranks
exit status of rank 2: killed by signal 9
Last edited by b60507 on Sat Aug 29, 2009 12:25 am, edited 1 time in total.

support_vasp
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Re: i can't run mpi job : rank 2 in job 1 abinitio01_57362 caused collective abort of all ranks

#2 Post by support_vasp » Wed Sep 04, 2024 12:19 pm

Hi,

We're sorry that we didn’t answer your question. This does not live up to the quality of support that we aim to provide. The team has since expanded. If we can still help with your problem, please ask again in a new post, linking to this one, and we will answer as quickly as possible.

Best wishes,

VASP


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